1ZF6

TGG DUPLEX A-DNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.306
  • R-Value Work: 0.256

Literature

Macromolecules
Sequence Display for 1ZF6

Classification: DNA

Total Structure Weight: 6235.21

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*CP*CP*CP*CP*AP*TP*GP*GP*GP*G)-3' A, B 10 synthetic

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

B SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.306
  • R-Value Work: 0.256
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 25.24 α = 90.00
b = 41.18 β = 90.00
c = 44.41 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-04-19
  • Released Date: 2005-05-10
  • Deposition author(s): Hays, F.A., Teegarden, A.T., Jones, Z.J.R., Harms, M., Raup, D., Watson, J., Cavaliere, E., Ho, P.S.

Revision History

  • Version 1_0: 2005-05-10

    Type: Initial release

  • Version 1_1: 2008-04-30

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2017-10-11

    Type: Refinement description