1YNV

Asp79 makes a large, unfavorable contribution to the stability of RNase Sa


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.178
  • R-Value Work: 0.152

Literature

Macromolecules
Sequence Display for 1YNV

Classification: HYDROLASE

Total Structure Weight: 10679.61

Macromolecule Entities
Molecule Chains Length Organism Details
Guanyl-specific ribonuclease Sa X 96 Kitasatospora aureofaciens EC#: 3.1.27.3 IUBMB
Mutation: Q94K
Gene Name(s): rnaSA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

X SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.178
  • R-Value Work: 0.152
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 33.31 α = 90.00
b = 42.99 β = 90.00
c = 55.80 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-01-25
  • Released Date: 2005-07-19
  • Deposition author(s): Trevino, S.R., Gokulan, K., Newsom, S., Thurlkill, R.L., Shaw, K.L., Mitkevich, V.A., Makarov, A.A., Sacchettini, J.C., Scholtz, J.M., Pace, C.N.

Revision History

  • Version 1_0: 2005-07-19

    Type: Initial release

  • Version 1_1: 2008-04-30

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance