Crystal structure of the PDK3-L2 complex DOI:10.2210/pdb1y8p/pdb

1Y8P   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Transferase Structure Weight: 63301.72 Molecule: [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3 Polymer: 1 Type: protein Length: 419 Chains: A EC#: 2.7.11.2    Organism Homo sapiens Gene Names PDK3 PDHK3 UniProtKB:   Protein Feature View | Search PDB | Q15120     Molecule: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex Polymer: 2 Type: protein Length: 128 Chains: B EC#: 2.3.1.12    Organism Homo sapiens Gene Names DLAT DLTA UniProtKB:   Protein Feature View | Search PDB | P10515         Source Hide Polymer: 1 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli bl21   Polymer: 2 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli bl21       Related PDB Entries Hide Identifier Details 1Y8N  unliganded (apo) form  1Y8O  ADP-bound form      Ligand Chemical Component Hide Identifier Formula Name Interactions ATP Search  Download  C10 H16 N5 O13 P3 ADENOSINE-5'-TRIPHOSPHATE   Ligand Explorer K Search  Download  K POTASSIUM ION   Ligand Explorer MG Search  Download  Mg MAGNESIUM ION   Ligand Explorer RED Search  Download  C8 H16 O2 S2 DIHYDROLIPOIC ACID   Ligand Explorer     External Ligand Annotations Hide Identifier   Binding Affinity (Sequence Identity %) ATP Search  Download  N/A in BindingDB N/A in BindingMoad Kd: 840 nM - data from PDBbind       External Domain Annotations Hide SCOP Classification v1.75: 3 Domains - data from SCOP   CATH Classification v3.4.0: 2 Domains - data from CATH   Pfam Classification: 3 Domains - data from Pfam   GO Terms: 23 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA,PQS (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Kato, M.,  Chuang, J.L.,  Wynn, R.M.,  Chuang, D.T. Deposition:   2004-12-13 Release:   2005-05-24 Last Modified (REVDAT):   2011-10-05     Revision History    Hide Mouse over text for details 2011-10-05 Non-polymer description 2011-07-13 Biological assembly 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors Resolution[Å]:   2.63 R-Value: 0.205 (obs.) R-Free: 0.230 Space Group: P 65 2 2 Unit Cell:   Length [Å] Angles [°] a = 120.90 α = 90.00  b = 120.90 β = 90.00  c = 240.09 γ = 120.00