1XCV

Crystal Structure Of (H79AC102D)Dtxr complexed with Nickel(II)

Structural Biology Knowledgebase: 1XCV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.300
  • R-Value Work: 0.279

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1XCV

Classification: DNA BINDING PROTEIN

Total Structure Weight: 15767.80

Macromolecule Entities
Molecule Chains Length Organism Details
Diphtheria toxin repressor mutant A 139 Corynebacterium diphtheriae Mutation: H79A, C102D
Gene Name(s): dtxR DIP1414

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NI
Query on NI

A NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.300
  • R-Value Work: 0.279
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 63.08 α = 90.00
b = 63.08 β = 90.00
c = 105.99 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-09-03
  • Released Date: 2005-08-16
  • Deposition author(s): D'aquino, J.A., Ringe, D.

Revision History

  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4