1W6J

Structure of human OSC in complex with Ro 48-8071

Structural Biology Knowledgebase: 1W6J SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.199
  • R-Value Work: 0.170

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1W6J

Classification: ISOMERASE

Total Structure Weight: 84931.26

Macromolecule Entities
Molecule Chains Length Organism Details
LANOSTEROL SYNTHASE A 732 Homo sapiens EC#: 5.4.99.7 IUBMB
Gene Name(s): LSS Gene View OSC
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
R71
Query on R71

A [4-({6-[ALLYL(METHYL)AMINO]HEXYL}OXY)-2-FLUOROPHENYL](4- BROMOPHENYL)METHANONE
Ro 48-8071 (Synonym)
C23 H27 Br F N O2
CMYCCJYVZIMDFU-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BOG
Query on BOG

A B-OCTYLGLUCOSIDE
C14 H28 O6
HEGSGKPQLMEBJL-RKQHYHRCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
C14
Query on C14

A TETRADECANE
C14 H30
BGHCVCJVXZWKCC-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
R71 IC50: 5.7 - 223.87 nM (100) BindingDB

N/A in BindingMoad
IC50: 6.5 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.199
  • R-Value Work: 0.170
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 189.91 α = 90.00
b = 202.42 β = 90.00
c = 62.64 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-08-18
  • Released Date: 2004-10-29
  • Deposition author(s): Thoma, R., Schulz-Gasch, T., D'Arcy, B., Benz, J., Aebi, J., Dehmlow, H., Hennig, M., Ruf, A.

Revision History

  • 2013-11-20
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2013-11-20
    Type: Version format compliance | Details: REMARK 4
  • 2013-11-20
    Type: Non-polymer description | Details: FORMUL,HETSYN,REMARK 600
  • 2013-11-20
    Type: Other | Details: REMARK 525,REMARK 280
  • 2013-11-20
    Type: Geometry validation | Details: REMARK 500