HIV-1 PROTEASE IN COMPLEX WITH FLUORO SUBSTITUTED DIOL-BASED C2-SYMMETRIC INHIBITOR     DOI:10.2210/pdb1w5x/pdb

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Primary Citation       Molecular Description Hide Classification: Hydrolase/hydrolase Inhibitor Structure Weight: 24781.11   Molecule: POL POLYPROTEIN Polymer: 1 Type: polypeptide(L) Length: 110 Chains: A, B EC#: 3.4.23.16    Fragment: RESIDUES 58-167       Source Hide Polymer: 1 Scientific Name: Human immunodeficiency virus Common Name: Hiv-1 Expression System: Escherichia coli         Related PDB Entries Hide Id Details 1AJV  HIV-1 PROTEASE IN COMPLEX WITH THE CYCLIC SULFAMIDE INHIBITOR AHA006  1AJX  HIV-1 PROTEASE IN COMPLEX WITH THE CYCLIC UREA INHIBITOR AHA001  1AXA  ACTIVE-SITE MOBILITY IN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 PROTEASE AS DEMONSTRATED BY CRYSTAL STRUCTURE OF A28S MUTANT  1BQM  HIV-1 RT/HBY 097  1BQN  TYR 188 LEU HIV-1 RT/HBY 097  1D4H  HIV-1 PROTEASE IN COMPLEX WITH THE INHIBITOR BEA435  1D4I  HIV-1 PROTEASE IN COMPLEX WITH THE INHIBITOR BEA425  1D4J  HIV-1 PROTEASE IN COMPLEX WITH THE INHIBITOR MSL370  1DLO  HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1DW6  STRUCTURAL AND KINETIC ANALYSIS OF DRUG RESISTANT MUTANTS OF HIV-1 PROTEASE  1EBK  STRUCTURAL AND KINETIC ANALYSIS OF DRUG RESISTANT MUTANTS OF HIV-1 PROTEASE  1EBW  HIV-1 PROTEASE IN COMPLEX WITH THE INHIBITOR BEA322  1EBY  HIV-1 PROTEASE IN COMPLEX WITH THE INHIBITOR BEA369  1EBZ  HIV-1 PROTEASE IN COMPLEX WITH THE INHIBITOR BEA388  1EC0  HIV-1 PROTEASE IN COMPLEX WITH THE INHIBITOR BEA403  1EC1  HIV-1 PROTEASE IN COMPLEX WITH THE INHIBITOR BEA409  1EC2  HIV-1 PROTEASE IN COMPLEX WITH THE INHIBITOR BEA428  1EC3  HIV-1 PROTEASE IN COMPLEX WITH THE INHIBITOR MSA367  1EET  HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH THE INHIBITOR MSC204  1HBV  HIV-1 PROTEASE COMPLEXED WITH SB203238  1HEF  HIV-1 PROTEASE COMPLEXED WITH SKF 108738 ( HEF)  1HEG  HIV-1 PROTEASE COMPLEXED WITH SKF 107457 ( HEG)  1HIH  HIV-1 PROTEASE COMPLEXED WITH INHIBITOR CGP 53820  1HMV  HIV-1 REVERSE TRANSCRIPTASE  1HNI  HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE (HIV-1RT) MUTANT WITH CYS 280 REPLACED BY SER (C280S)  1HNV  HIV-1 REVERSE TRANSCRIPTASE (HIV-1 RT) MUTANT WITH CYS 280 REPLACED BY SER (C280S )  1HOS  HIV-1 PROTEASE COMPLEX WITH SB204144  1HPS  HIV-1 PROTEASE COMPLEXED WITH SB206343  1HPZ  HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1HQE  HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1HQU  HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1HRH  RIBONUCLEASE H DOMAIN OF HIV-1 REVERSE TRANSCRIPTASE  1HTE  HIV-1 PROTEASE COMPLEXED WITH GR123976  1HTF  HIV-1 PROTEASE COMPLEXED WITH GR126045  1HTG  HIV-1 PROTEASE COMPLEXED WITH GR137615  1HVK  HIV-1 PROTEASE COMPLEXED WITH THE INHIBITOR A76928 (S,S)  1HVP  HIV-1 PROTEASE COMPLEX WITH SUBSTRATE ( THEORETICAL MODEL)  1HVU  HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE COMPLEXED WITH A 33-BASE NUCLEOTIDE RIBONUCLEIC ACID PSEUDOKNOT  1HYS  CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEXWITH A POLYPURINE TRACT RNA:DNA  1IKV  K103N MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITHEFIVARENZ  1IKW  WILD TYPE HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITHEFAVIRENZ  1IKX  K103N MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITHTHE INHIBITOR PNU142721  1IKY  HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH THE INHIBITORMSC194  1J5O  CRYSTAL STRUCTURE OF MET184ILE MUTANT OF HIV -1 REVERSETRANSCRIPTASE IN COMPLEX WITH DOUBLE STRANDED DNA TEMPLATE-PRIMER  1MER  HIV-1 MUTANT (I84V) PROTEASE COMPLEXED WITH DMP450  1MES  HIV-1 MUTANT (I84V) PROTEASE COMPLEXED WITH DMP323  1MET  HIV-1 MUTANT (V82F) PROTEASE COMPLEXED WITH DMP323  1MEU  HIV-1 MUTANT (V82F, I84V) PROTEASE COMPLEXED WITH DMP323  1N5Y  HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO POST-TRANSLOCATION AZTMP-TERMINATED DNA ( COMPLEX P)  1N6Q  HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO PRE-TRANSLOCATION AZTMP-TERMINATED DNA ( COMPLEX N)  1QE1  CRYSTAL STRUCTURE OF 3TC-RESISTANT M184I MUTANT OF HIV-1 REVERSE TRANSCRIPTASE  1QMC  C-TERMINAL DNA-BINDING DOMAIN OF HIV-1 INTEGRASE, NMR, 42 STRUCTURES  1R0A  CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE COVALENTLYTETHERED TO DNA TEMPLATE -PRIMER SOLVED TO 2.8 ANGSTROMS  1RDH  HIV-1 REVERSE TRANSCRIPTASE (RIBONUCLEASE H DOMAIN)  1RTD  STRUCTURE OF A CATALYTIC COMPLEX OF HIV-1 REVERSE TRANSCRIPTASE: IMPLICATIONS FOR NUCLEOSIDE ANALOG DRUG RESISTANCE  1RVL  REVERSE TRANSCRIPTASE NON-NUCLEOSIDE BINDING SITE COMPLEXED WITH ALPHA-APA (R89439) ( THEORETICAL MODEL)  1RVM  REVERSE TRANSCRIPTASE NON-NUCLEOSIDE BINDING SITE COMPLEXED WITH HEPT (THEORETICAL MODEL)  1RVN  REVERSE TRANSCRIPTASE NON-NUCLEOSIDE BINDING SITE COMPLEXED WITH PHENYL-ISOINDOLINONE ( THEORETICAL MODEL)  1RVO  REVERSE TRANSCRIPTASE NON-NUCLEOSIDE BINDING SITE COMPLEXED WITH NEVIRAPINE (THEORETICAL MODEL)  1RVP  REVERSE TRANSCRIPTASE NON-NUCLEOSIDE BINDING SITE COMPLEXED WITH THIAZOLOISOINDOLINONE ( THEORETICAL MODEL)  1RVQ  REVERSE TRANSCRIPTASE NON-NUCLEOSIDE BINDING SITE COMPLEXED WITH TIBO (THEORETICAL MODEL)  1RVR  REVERSE TRANSCRIPTASE NON-NUCLEOSIDE BINDING SITE COMPLEXED WITH IMIDAZODIPYRIDODIAZEPINE (UK -129,485) (THEORETICAL MODEL)  1S6P  CRYSTAL STRUCTURE OF HUMAN IMMUNODEFICIENCY VIRUS TYPE 1REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH JANSSEN-R100943  1S6Q  CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) INCOMPLEX WITH JANSSEN- R147681  1S9E  CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) INCOMPLEX WITH JANSSEN- R129385  1S9G  CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) INCOMPLEX WITH JANSSEN- R120394.  1SBG  HIV-1 PROTEASE COMPLEXED WITH THE INHIBITOR SB203386  1SUQ  CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) INCOMPLEX WITH JANSSEN- R185545  1SV5  CRYSTAL STRUCTURE OF K103N MUTANT HIV-1 REVERSETRANSCRIPTASE (RT) IN COMPLEX WITH JANSSEN-R165335  1T03  HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO TENOFOVIRTERMINATED TEMPLATE-PRIMER (COMPLEX P)  1T05  HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO TEMPLATE-PRIMERWITH TENOFOVIR-DIPHOSPHATE BOUND AS THE INCOMINGNUCLEOTIDE SUBSTRATE  1TV6  HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH CP-94,707  1TVR  HIV-1 RT/9-CL TIBO  1UWB  TYR 181 CYS HIV-1 RT/8-CL TIBO  1W5V  HIV-1 PROTEASE IN COMPLEX WITH FLUORO SUBSTITUTED DIOL-BASED C2-SYMMETRIC INHIBITOR  1W5W  HIV-1 PROTEASE IN COMPLEX WITH FLUORO SUBSTITUTED DIOL-BASED C2-SYMMETRIC INHIBITOR  1W5Y  HIV-1 PROTEASE IN COMPLEX WITH FLUORO SUBSTITUTED DIOL-BASED C2-SYMMETRIC INHIBITOR  2HMI  HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH A DOUBLE-STRANDED DEOXYRIBONUCLEIC ACID AND FAB28  3HVT  REVERSE TRANSCRIPTASE  3TLH  STRUCTURAL STUDIES OF HIV AND FIV PROTEASES COMPLEXED WITHAN EFFICIENT INHIBITOR OF FIV PR        Ligand Chemical Component Hide Identifier Name Formula Interaction View Links BE5     (2R,3R,4R,5R)-2,5-BIS[(2,3-DIFLUOROBENZYL)OXY]- 3,4-DIHYDROXY-N,N'-BIS[(1S,2R)-2 -HYDROXY- 2,3-DIHYDRO-1H-INDEN-1-YL]HEXANEDIAMIDE C38 H36 F4 N2 O8 Ligand Explorer       Derived Data Hide SCOP Classification v1.75 - (1 Domains) CATH Classification v3.2.0 - (2 Domains) PFAM Classification - (2 Domains) GO Terms - (34 Terms)     Reset Layout

Biological Assembly     More Images... View in Jmol Other Viewers close KiNG WebMol QuickPDB FirstGlance Kiosk SimpleViewer Protein Workshop Ligand Explorer Biological assembly assigned by authors and generated by PQS (software)         Deposition Summary Hide Authors:   Lindberg, J.,   Pyring, D.,   Loewgren, S.,   Rosenquist, A.,   Zuccarello, G.,   Kvarnstroem, I.,   Zhang, H.,   Vrang, L.,   Claesson, B.,   Hallberg, A.,   Samuelsson, B.,   Unge, T. Deposition:   2004-08-10 Release:   2004-12-22 Last Modified (REVDAT):   2009-02-24       Experimental Details Hide Method:   X-RAY DIFFRACTION Experimental Data:    [ EDS ] Resolution[Å]: 1.90 R-Value: 0.203 (obs.) R-Free: 0.216 Space Group: P 21 21 2 Unit Cell:   Length [Å] Angles [°] a = 58.46 α = 90.00  b = 86.32 β = 90.00  c = 46.57 γ = 90.00        Structure Links Hide Molecule of the Month Features: HIV-1 Protease