POP-OUT | CLOSE
 
BACE (BETA SECRETASE) IN COMPLEX WITH A NANOMOLAR NON-PEPTIDIC INHIBITOR
1W51
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase/inhibitor
    Structure Weight: 46862.21
    Molecule: BETA-SECRETASE 1
    Polymer: 1 Type: protein Length: 411
    Chains: A
    EC#: 3.4.23.46   
    Fragment: ACTIVE PROTEASE DOMAIN, RESIDUES 43-453
    Mutation: YES
    Organism: Homo sapiens
    Gene Names: Gene View for BACE1 BACE KIAA1149
    UniProtKB: Protein Feature View | Search PDB | P56817  
     
  •   Structure Validation Hide

    Download full validation report    

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1FKN  STRUCTURE OF BETA-SECRETASE COMPLEXED WITH INHIBITOR 
    1M4H  CRYSTAL STRUCTURE OF BETA-SECRETASE COMPLEXED WITHINHIBITOR OM00-3 
    1PY1  COMPLEX OF GGA1-VHS DOMAIN AND BETA- SECRETASE C-TERMINALPHOSPHOPEPTIDE 
    1SGZ  CRYSTAL STRUCTURE OF UNBOUND BETA-SECRETASE CATALYTICDOMAIN. 
    1UJJ  VHS DOMAIN OF HUMAN GGA1 COMPLEXED WITH C -TERMINAL PEPTIDEFROM BACE 
    1UJK  VHS DOMAIN OF HUMAN GGA1 COMPLEXED WITH C -TERMINALPHOSPHOPEPTIDE FROM BACE 
    1W50  APO STRUCTURE OF BACE (BETA SECRETASE) 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    IOD
    Search 
    Download 
    IOD I
    IODIDE ION
    L01
    Search 
    Download 
    L01 C32 H41 N3 O4
    3-[({(1S,2R)-1-BENZYL-2-HYDROXY-3-[(3-METHOXYBENZYL)AMINO]PROPYL}AMINO)(HYDROXY)METHYL]- N,N-DIPROPYLBENZAMIDE
    L01:1W51
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    L01
    Search 
    Download 
    L01
    IC50: 500 nM (99) - data from BindingDB  
    N/Ain BindingMoad
    N/Ain PDBbind
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PQS (software)
Downloadable viewers: