CRYSTAL STRUCTURE OF THE PDK1 PLECKSTRIN HOMOLOGY (PH) DOMAIN BOUND TO INOSITOL (1,3,4,5)-TETRAKISPHOSPHATE DOI:10.2210/pdb1w1d/pdb

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Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Transferase Structure Weight: 18605.54 Molecule: 3-PHOSPHOINOSITIDE DEPENDENT PROTEIN KINASE-1 Polymer: 1 Type: protein Length: 151 Chains: A EC#: 2.7.11.1    Fragment: PLECKSTRIN HOMOLOGY DOMAIN, RESIDUES 409-556 Organism Homo sapiens Gene Names PDPK1 PDK1 UniProtKB:   Protein Feature View | Search PDB | O15530         Source Hide Polymer: 1 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 1H1W  HIGH RESOLUTION CRYSTAL STRUCTURE OF THE HUMAN PDK1 CATALYTIC DOMAIN  1OKY  STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH STAUROSPORINE  1OKZ  STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH UCN-01  1UU3  STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH LY333531  1UU7  STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH BIM-2  1UU8  STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH BIM-1  1UU9  STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH BIM-3  1UVR  STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH BIM-8  1W1G  CRYSTAL STRUCTURE OF THE PDK1 PLECKSTRIN HOMOLOGY (PH) DOMAIN BOUND TO DIC4-PHOSPHATIDYLINOSITOL (3,4,5)-TRISPHOSPHATE  1W1H  CRYSTAL STRUCTURE OF THE PDK1 PLECKSTRIN HOMOLOGY (PH) DOMAIN      Ligand Chemical Component Hide Identifier Formula Name Interactions 4IP Search  Download  C6 H16 O18 P4 INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE   Ligand Explorer AU Search  Download  Au GOLD ION   Ligand Explorer GOL Search  Download  C3 H8 O3 GLYCEROL   Ligand Explorer     External Ligand Annotations Hide Identifier   Binding Affinity (Sequence Identity %) 4IP Search  Download  N/A in BindingDB Ki: 300 nM - data from BindingMOAD   Ki: 300 nM - data from PDBbind       External Domain Annotations Hide SCOP Classification v1.75: 1 Domain - data from SCOP   CATH Classification v3.4.0: 1 Domain - data from CATH       Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PQS (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Komander, D.,  Deak, M.,  Alessi, D.R.,  Van Aalten, D.M.F. Deposition:   2004-06-21 Release:   2004-11-19 Last Modified (REVDAT):   2009-02-24     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   1.50 R-Value: 0.147 (obs.) R-Free: 0.200 Space Group: P 21 Unit Cell:   Length [Å] Angles [°] a = 35.40 α = 90.00  b = 58.92 β = 101.48  c = 36.58 γ = 90.00