1VOM

COMPLEX BETWEEN DICTYOSTELIUM MYOSIN AND MGADP AND VANADATE AT 1.9A RESOLUTION

Structural Biology Knowledgebase: 1VOM SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Observed: 0.194

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1VOM

Classification: MUSCLE PROTEIN

Total Structure Weight: 87316.18

Macromolecule Entities
Molecule Chains Length Organism Details
MYOSIN A 762 Dictyostelium discoideum Fragment: TRUNCATED AT RESIDUE 762
Mutation: K42D, Y312C, S321E, E322D, Q443S, K446A, L489V
Details: THIS MOLECULE WAS TRUNCATED TO YIELD A FRAGMENT THAT CRYSTALLIZES READILY
Gene Name(s): mhcA DDB_G0286355

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ADP
Query on ADP

A ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
VO4
Query on VO4

A VANADATE ION
O4 V
LSGOVYNHVSXFFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Observed: 0.194
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 84.50 α = 90.00
b = 145.40 β = 90.00
c = 153.80 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1995-11-09
  • Released Date: 1996-12-23
  • Deposition author(s): Rayment, I., Smith, C.A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4