1VKX

CRYSTAL STRUCTURE OF THE NFKB P50/P65 HETERODIMER COMPLEXED TO THE IMMUNOGLOBULIN KB DNA

Structural Biology Knowledgebase: 1VKX SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.320
  • R-Value Work: 0.208

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1VKX

Classification: TRANSCRIPTION / DNA

Total Structure Weight: 73235.36


Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (NF-KAPPA B P65 SUBUNIT) A 273 Mus musculus Mutation: P19A
Gene Name(s): Rela Nfkb3
PROTEIN (NF-KAPPA B P50 SUBUNIT) B 312 Mus musculus Gene Name(s): Nfkb1
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*TP*GP*GP*GP*GP*AP*CP*TP*TP*TP*CP*C)-3') C 12 synthetic ACTIVE NF-KAPPA-B IS A HETERODIMER OF AN ABOUT 50 KD DNA-BINDING SUBUNIT AND THE WEAK DNA-BINDING SUBUNIT P65
DNA (5'-D(*AP*GP*GP*AP*AP*AP*GP*TP*CP*CP*CP*C)-3') D 12 synthetic ACTIVE NF-KAPPA-B IS A HETERODIMER OF AN ABOUT 50 KD DNA-BINDING SUBUNIT AND THE WEAK DNA-BINDING SUBUNIT P65


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.320
  • R-Value Work: 0.208
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 106.61 α = 90.00
b = 106.61 β = 90.00
c = 206.56 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-09-17
  • Released Date: 1998-12-09
  • Deposition author(s): Chen, F., Huang, D.B., Ghosh, G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4