Peanut lectin-lactose complex in the presence of 9mer peptide (PVIWSSATG) DOI:10.2210/pdb1v6l/pdb

1V6L   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Sugar Binding Protein Structure Weight: 100575.67 Molecule: Galactose-binding lectin Polymer: 1 Type: protein Length: 232 Chains: A, B, C, D Organism Arachis hypogaea UniProtKB:   Protein Feature View | Search PDB | P02872         Source Hide Polymer: 1 Scientific Name: Arachis hypogaea   Taxonomy   Common Name: Peanut   Polymer: 2 Scientific Name: Synthetic construct   Taxonomy     Polymer: 5 Scientific Name: Synthetic construct   Taxonomy         Related PDB Entries Hide Identifier Details 1CR7  Crystal structures of the peanut lectin-lactose at acidic pH  1V6I  Peanut lectin-lactose complex crystallized in orthorhombic form at acidic pH at 2.15 A  1V6J  peanut lectin-lactose complex crystallized in orthorhombic form at acidic pH at 2.90 A  1V6K  Peanut lectin-lactose complex in the presence of peptide(IWSSAGNVA) at 2.40 A  1V6M  Peanut lectin complex in the presence of 9mer peptide (IWSSAGNVA) at 2.70 A  1V6N  Peanut lectin with 9mer peptide (PVIWSSATG) at 3.50 A  1V6O  Peanut lectin complexed with 10mer peptide (PVRIWSSATG) at 3.00 A  2PEL  Conformation, protein-carbohydrate ineractions and a novel subunit association in the refined peanut lectin-lactose complex      Ligand Chemical Component Hide Identifier Formula Name Interactions BGC Search  Download  C6 H12 O6 BETA-D-GLUCOSE   Ligand Explorer CA Search  Download  Ca CALCIUM ION   Ligand Explorer GAL Search  Download  C6 H12 O6 BETA-D-GALACTOSE   Ligand Explorer GLC Search  Download  C6 H12 O6 ALPHA-D-GLUCOSE   Ligand Explorer MN Search  Download  Mn MANGANESE (II) ION   Ligand Explorer     External Domain Annotations Hide SCOP Classification v1.75: 4 Domains - data from SCOP   CATH Classification v3.4.0: 4 Domains - data from CATH   Pfam Classification: 1 Domain - data from Pfam   GO Terms: 1 Term - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Kundhavai Natchiar, S.,  Arockia Jeyaprakash, A.,  Ramya, T.N.C.,  Thomas, C.J.,  Suguna, K.,  Surolia, A.,  Vijayan, M. Deposition:   2003-12-01 Release:   2004-02-10 Last Modified (REVDAT):   2009-08-04     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.50 R-Value: 0.173 (obs.) R-Free: 0.219 Space Group: P 21 21 2 Unit Cell:   Length [Å] Angles [°] a = 128.28 α = 90.00  b = 124.64 β = 90.00  c = 75.75 γ = 90.00      Molecule of the Month Hide Concanavalin A and Circular Permutation ABO Blood Type Glycosyltransferases