1UYM

HUMAN HSP90-BETA WITH PU3 (9-BUTYL-8(3,4,5-TRIMETHOXY-BENZYL)-9H-PURIN-6-YLAMINE)

Structural Biology Knowledgebase: 1UYM SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.294
  • R-Value Work: 0.235

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1UYM

Classification: CHAPERONE

Total Structure Weight: 25043.47

Macromolecule Entities
Molecule Chains Length Organism Details
HEAT SHOCK PROTEIN HSP 90-BETA A 220 Homo sapiens Fragment: N-TERMINAL DOMAIN, RESIDUES 1-220
Gene Name(s): HSP90AB1 Gene View HSP90B HSPC2 HSPCB
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PU3
Query on PU3

A 9-BUTYL-8-(3,4,5-TRIMETHOXYBENZYL)-9H-PURIN- 6-AMINE
C19 H25 N5 O3
TUOSCZDRWRYPRS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
PU3 EC50: 15000 - 40000 nM (100) BindingDB
IC50: 1000 nM (100) BindingDB

N/A in BindingMoad
IC50: 1000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.294
  • R-Value Work: 0.235
  • Space Group: I 2 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 66.86 α = 90.00
b = 90.71 β = 90.00
c = 96.29 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-03-02
  • Released Date: 2004-08-17
  • Deposition author(s): Wright, L., Barril, X., Dymock, B., Sheridan, L., Surgenor, A., Beswick, M., Drysdale, M., Collier, A., Massey, A., Davies, N., Fink, A., Fromont, C., Aherne, W., Boxall, K., Sharp, S., Workman, P., Hubbard, R.E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4