1TYR

TRANSTHYRETIN COMPLEX WITH RETINOIC ACID

Structural Biology Knowledgebase: 1TYR SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Observed: 0.196

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1TYR

Classification: RETINOL-BINDING

Total Structure Weight: 28155.88

Macromolecule Entities
Molecule Chains Length Organism Details
TRANSTHYRETIN A, B 127 Homo sapiens Gene Name(s): TTR Gene View PALB

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
REA
Query on REA

A, B RETINOIC ACID
C20 H28 O2
SHGAZHPCJJPHSC-YCNIQYBTSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
REA N/A in BindingDB
Kd: 100 nM  BindingMOAD
Kd: 100 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Observed: 0.196
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 43.80 α = 90.00
b = 86.22 β = 90.00
c = 65.78 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1995-05-12
  • Released Date: 1995-09-15
  • Deposition author(s): Zanotti, G., D'Acunto, M.R., Malpeli, G., Folli, C., Berni, R.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4