1TDH

Crystal structure of human endonuclease VIII-like 1 (NEIL1)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.194

Literature

Macromolecules
Sequence Display for 1TDH

Classification: HYDROLASE

Total Structure Weight: 41043.12

Macromolecule Entities
Molecule Chains Length Organism Details
nei endonuclease VIII-like 1 A 364 Homo sapiens EC#: 3.2.2 IUBMB 4.2.99.18 IUBMB
Mutation: N147S, K242R
Gene Name(s): NEIL1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TRS
Query on TRS

A 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
TRIS BUFFER (Synonym)
C4 H12 N O3
LENZDBCJOHFCAS-UHFFFAOYSA-O
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.194
  • Space Group: H 3

Unit Cell:

Length (Å) Angle (°)
a = 132.19 α = 90.00
b = 132.19 β = 90.00
c = 51.09 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-05-22
  • Released Date: 2004-07-20
  • Deposition author(s): Doublie, S., Bandaru, V., Bond, J.P., Wallace, S.S.

Revision History

  • Version 1_0: 2004-07-20

    Type: Initial release

  • Version 1_1: 2008-04-30

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance