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Structure Of The DNA Binding Domains Of IRF3, ATF-2 and Jun Bound To DNA
DOI:10.2210/pdb1t2k/pdb   NDB ID: PD0540
1T2K
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transcription/dna
    Structure Weight: 59626.46
    Molecule: 31-MER
    Polymer: 1 Type: dna Length: 31
    Chains: E
    Details: interferon-b enhancer
    Molecule: 31-MER
    Polymer: 2 Type: dna Length: 31
    Chains: F
    Details: interferon-b enhancer
    Molecule: Interferon regulatory factor 3
    Polymer: 3 Type: protein Length: 112
    Chains: A, B
    Fragment: N-terminal DNA binding domain
    Organism Homo sapiens
    Gene Name IRF3
    UniProtKB:   Protein Feature View | Search PDB | Q14653  
    Molecule: Transcription factor AP-1
    Polymer: 4 Type: protein Length: 62
    Chains: C
    Fragment: bZip domain
    Mutation: C269S
    Organism Homo sapiens
    Gene Name JUN
    UniProtKB:   Protein Feature View | Search PDB | P05412  
    Molecule: Cyclic-AMP-dependent transcription factor ATF-2
    Polymer: 5 Type: protein Length: 61
    Chains: D
    EC#: 2.3.1.48   
    Fragment: bZip domain
    Mutation: C351S
    Organism Homo sapiens
    Gene Names ATF2 CREB2 CREBP1
    UniProtKB:   Protein Feature View | Search PDB | P15336  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli bl21(de3)  
    Polymer: 4
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli bl21(de3)  
    Polymer: 5
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli bl21(de3)  
     
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  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: PD0540
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Panne, D.,  Maniatis, T.,  Harrison, S.C.

    Deposition:   2004-04-21
    Release:   2004-11-16
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   3.00
    R-Value: 0.257 (obs.)
    R-Free: 0.296
    Space Group: C 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 186.38 α = 90.00 
    b = 65.21 β = 93.44 
    c = 83.85 γ = 90.00