HIV-1 reverse transcriptase crosslinked to tenofovir terminated template-primer (complex P) DOI:10.2210/pdb1t03/pdb   NDB ID: PD0536

1T03   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Transferase/antibody/dna Structure Weight: 177532.46 Molecule: Synthetic oligonucleotide template Polymer: 1 Type: dna Length: 27 Chains: T Molecule: Synthetic oligonucleotide primer Polymer: 2 Type: dna Length: 21 Chains: P Molecule: POL polyprotein Polymer: 3 Type: protein Length: 558 Chains: A EC#: 2.7.7.49    2.7.7.7    3.1.26.13    Fragment: Reverse transcriptase, p66 subunit Mutation: Q258C, C280S Organism Human immunodeficiency virus 1 Gene Name gag-pol UniProtKB:   Protein Feature View | Search PDB | P03366     Molecule: POL polyprotein Polymer: 4 Type: protein Length: 437 Chains: B EC#: 2.7.7.49    2.7.7.7    3.1.26.13    Fragment: Reverse transcriptase, p51 subunit Mutation: C280S Organism Human immunodeficiency virus 1 Gene Name gag-pol UniProtKB:   Protein Feature View | Search PDB | P03366   Molecule: monoclonal antibody light chain Polymer: 5 Type: protein Length: 211 Chains: L Fragment: Fab light chain domain Organism Mus musculus Molecule: monoclonal antibody heavy chain Polymer: 6 Type: protein Length: 225 Chains: H Fragment: Fab heavy chain domain Organism Mus musculus     Source Hide Polymer: 1 Scientific Name: Synthetic construct   Taxonomy     Polymer: 2 Scientific Name: Synthetic construct   Taxonomy     Polymer: 3 Scientific Name: Human immunodeficiency virus 1   Taxonomy   Expression System: Escherichia coli   Polymer: 4 Scientific Name: Human immunodeficiency virus 1   Taxonomy   Expression System: Escherichia coli   Polymer: 5 Scientific Name: Mus musculus   Taxonomy   Common Name: House mouse   Polymer: 6 Scientific Name: Mus musculus   Taxonomy   Common Name: House mouse       Related PDB Entries Hide Identifier Details 1N5Y  HIV-1 Reverse Transcriptase Crosslinked To Post-Translocation Aztmp-Terminated DNA (Complex P)  1N6Q  HIV-1 Reverse Transcriptase Crosslinked To Pre-Translocation Aztmp-Terminated DNA (Complex N)  1T05  HIV-1 reverse transcriptase crosslinked to template-primer with tenofovir-diphosphate bound as the incoming nucleotide substrate  2HMI  HIV-1 Reverse Transcriptase Complexed With A Double-Stranded DNA and Fab28      Ligand Chemical Component Hide Identifier Formula Name Interactions MG Search  Download  Mg MAGNESIUM ION   Ligand Explorer     Modified Residues Hide Identifier Formula Parent Type MRG Search  C13 H20 N5 O7 P S DG dnaLinking TFO Search  C9 H14 N5 O4 P DA dnaLinking     External Domain Annotations Hide SCOP Classification v1.75: 7 Domains - data from SCOP   CATH Classification v3.4.0: 13 Domains - data from CATH   Pfam Classification: 13 Domains - data from Pfam       Structural Biology Knowledgebase Data Hide   Nucleic Acid Database Hide View the NDB ID associated with this structure: PD0536     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Tuske, S.,  Sarafianos, S.G.,  Ding, J.,  Arnold, E. Deposition:   2004-04-07 Release:   2004-05-11 Last Modified (REVDAT):   2009-02-24     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   3.10 R-Value: 0.256 (work) R-Free: 0.295 Space Group: P 32 1 2 Unit Cell:   Length [Å] Angles [°] a = 166.78 α = 90.00  b = 166.78 β = 90.00  c = 221.13 γ = 120.00      Molecule of the Month Hide Epidermal Growth Factor Nanobodies Antibodies Reverse Transcriptase Hemagglutinin