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HIV-1 YU2 GP120 ENVELOPE GLYCOPROTEIN COMPLEXED WITH CD4 AND INDUCED NEUTRALIZING ANTIBODY 17B
1RZK
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Viral Protein/immune System
    Structure Weight: 106297.04
    Molecule: ENVELOPE GLYCOPROTEIN GP120
    Polymer: 1 Type: protein Length: 313
    Chains: G
    Fragment: CORE
    Mutation: VARIABLE LOOPS SUBSTITUTED
    Details: part of Envelope polyprotein GP160
    Organism Human immunodeficiency virus 1
    Gene Name env
    UniProtKB:   Protein Feature View | Search PDB | P35961  
    Molecule: T-CELL SURFACE GLYCOPROTEIN CD4
    Polymer: 2 Type: protein Length: 185
    Chains: C
    Fragment: D1D2, N-TERMINAL TWO DOMAIN FRAGMENT
    Mutation: S184N, I185T
    Organism Homo sapiens
    Gene Name CD4
    UniProtKB:   Protein Feature View | Search PDB | P01730  
    Molecule: ANTIBODY 17B, LIGHT CHAIN
    Polymer: 3 Type: protein Length: 214
    Chains: L
    Fragment: FAB
    Organism Homo sapiens
    Molecule: ANTIBODY 17B, HEAVY CHAIN
    Polymer: 4 Type: protein Length: 229
    Chains: H
    Fragment: FAB
    Organism Homo sapiens
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Human immunodeficiency virus 1   Taxonomy   Expression System: Drosophila melanogaster  
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Cricetulus griseus  
    Polymer: 3
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Human herpesvirus 4  
    Polymer: 4
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Human herpesvirus 4  
     
  •   Related PDB Entries Hide
    Identifier Details
    1G9N  This deposit if the re-refinement of previously determined structure 1G9N with correct Fab 17b sequences 
    1RZ7   
    1RZ8   
    1RZF   
    1RZG   
    1RZI   
    1RZJ   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    NAG
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    NAG C8 H15 N O6
    N-ACETYL-D-GLUCOSAMINE
    NDG
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    NDG C8 H15 N O6
    2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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