1RV0

1930 Swine H1 Hemagglutinin complexed with LSTA

Structural Biology Knowledgebase: 1RV0 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.214

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1RV0

Classification: Viral Protein

Total Structure Weight: 163725.53

Macromolecule Entities
Molecule Chains Length Organism Details
hemagglutinin H, J, L 328 Influenza a virus Details: Hemagglutinin HA1 chain
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
hemagglutinin I, K, M 160 Influenza a virus Details: Hemagglutinin HA2 chain
Gene Name(s):

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DAN
Query on DAN

L 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID
C11 H17 N O8
JINJZWSZQKHCIP-UFGQHTETSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NDG
Query on NDG

H, J, L 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
C8 H15 N O6
OVRNDRQMDRJTHS-PVFLNQBWSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.214
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 202.04 α = 90.00
b = 82.94 β = 105.86
c = 176.88 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-12-12
  • Released Date: 2004-03-30
  • Deposition author(s): Skehel, J.J., Gamblin, S.J., Haire, L.F., Russell, R.J., Stevens, D.J., Xiao, B., Ha, Y., Vasisht, N., Steinhauer, D.A., Daniels, R.S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4