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Crystal Structure of the ATPase region of Saccharomyces Cerevisiae topoisomerase II
1PVG
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Isomerase
    Structure Weight: 98197.80
    Molecule: DNA topoisomerase II
    Polymer: 1 Type: protein Length: 418
    Chains: A, B
    EC#: 5.99.1.3   
    Fragment: N-terminal ATPase region
    Organism Saccharomyces cerevisiae
    Gene Names TOP2 TOR3 YNL088W N2244
    UniProtKB:   Protein Feature View | Search PDB | P06786  
     
  •   Structure Validation Hide

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  •   Source Hide
    Polymer: 1
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast Expression System: Escherichia coli  
     
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    Identifier Details
    1BGW  Saccharomyces cerevisiae Topoisomerase II Residues 410 - 1202 
    1BJT  Saccharomyces cerevisiae Topoisomerase II Residues 409 - 1201 
    1Q1D  Crystal Structure of the ATPase region of Saccharomyces Cerevisiae topoisomerase II bound to ICRF-187 (dexrazoxane) 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    ANP
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    ANP C10 H17 N6 O12 P3
    PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
    MG
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    MG Mg
    MAGNESIUM ION
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    MSE
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    MSE C5 H11 N O2 Se MET lPeptideLinking
     
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Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Classen, S.,  Olland, S.,  Berger, J.M.

    Deposition:   2003-06-27
    Release:   2003-08-26
    Last Modified (REVDAT):   2011-07-13
     
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    2011-07-13
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.80
    R-Value: 0.209 (obs.)
    R-Free: 0.241
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 58.46 α = 90.00 
    b = 71.08 β = 90.00 
    c = 216.13 γ = 90.00