1P4Z

Effect of Sequence on the Conformational Geometry of DNA Holliday Junctions

Structural Biology Knowledgebase: 1P4Z SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.236

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1P4Z

Classification: DNA

Total Structure Weight: 3114.00

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*CP*CP*AP*GP*TP*AP*CP*TP*GP*G)-3' A 10 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.236
  • Space Group: P 61 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 33.38 α = 90.00
b = 33.38 β = 90.00
c = 87.67 γ = 120.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2003-04-24
  • Released Date: 2003-09-02
  • Deposition author(s): Hays, F.A., Vargason, J.M., Ho, P.S.

Revision History

  • 2011-11-16
    Type: Atom occupancy | Details: Atom occupancy
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4