POP-OUT | CLOSE
 
Native HIV-1 Proteinase
1ODW
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase/hydrolase Inhibitor
    Structure Weight: 22123.30
    Molecule: HIV-1 PROTEASE
    Polymer: 1 Type: protein Length: 99
    Chains: A, B
    EC#: 3.4.23.16   
    Organism: Human immunodeficiency virus 1
    Gene Name: gag-pol
    UniProtKB: Protein Feature View | Search PDB | P04585  
     
  •   Structure Validation Hide

    Download full validation report    

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Human immunodeficiency virus 1   Taxonomy   Common Name: Hiv-1 Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1ODX   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    0E8
    Search 
    Download 
    0E8 C30 H45 N3 O6
    di-tert-butyl {iminobis[(2S,3S)-3-hydroxy- 1-phenylbutane-4,2-diyl]}biscarbamate
    0E8:1ODW
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    0E8
    Search 
    Download 
    0E8
    N/Ain BindingDB
    Ki: 100 nM - data from BindingMOAD  
    N/Ain PDBbind
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Thanki, N.,  Kervinen, J.,  Wlodawer, A.

    Deposition:   1996-09-16
    Release:   1997-04-01
    Last Modified (REVDAT):   2011-07-13
     
  •   Revision History    Hide
    Mouse over text for details
    2011-07-13
    Atom nomenclature
    2011-07-13
    Binding sites and description
    2011-07-13
    Non-polymer description
    2011-07-13
    Function and keywords
    2011-07-13
    Source and taxonomy
    2011-07-13
    Linkage
    2011-07-13
    Sequence database correspondence
    2011-07-13
    Polymer description
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.10
    R-Value: 0.165 (work)
    R-Free: n/a
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 52.00 α = 90.00 
    b = 59.40 β = 90.00 
    c = 62.20 γ = 90.00