1O4M

CRYSTAL STRUCTURE OF SH2 IN COMPLEX WITH MALONICACID.

Structural Biology Knowledgebase: 1O4M SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Observed: 0.190

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1O4M

Classification: SIGNALING PROTEIN

Total Structure Weight: 12479.16

Macromolecule Entities
Molecule Chains Length Organism Details
PROTO-ONCOGENE TYROSINE-PROTEIN KINASE SRC A 108 Homo sapiens EC#: 2.7.10.2 IUBMB
Fragment: SH2 DOMAIN
Gene Name(s): SRC Gene View SRC1

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MLA
Query on MLA

A MALONIC ACID
DICARBOXYLIC ACID C3; PROPANEDIOLIC ACID; METHANEDICARBOXYLIC ACID (Synonym)
C3 H4 O4
OFOBLEOULBTSOW-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
MLA IC50: >40000000 nM (100) BindingDB

IC50: 40000000 nM  BindingMOAD
IC50: >40000000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Observed: 0.190
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 26.55 α = 90.00
b = 58.44 β = 90.00
c = 64.27 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-06-15
  • Released Date: 2004-02-17
  • Deposition author(s): Lange, G., Loenze, P., Liesum, A.

Revision History

  • 2015-04-29
    Type: Non-polymer description | Details: --
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4