1NVY

Strontium bound to the Holliday junction sequence d(TCGGTACCGA)4

Structural Biology Knowledgebase: 1NVY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.207

Literature

Macromolecules
Sequence Display for 1NVY

Classification: DNA

Total Structure Weight: 6528.16

Macromolecule Entities
Molecule Chains Length Organism Details
d(TCGGTACCGA)4 A, B 10 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SR
Query on SR

A, B STRONTIUM ION
Sr
PWYYWQHXAPXYMF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.207
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 63.73 α = 90.00
b = 25.32 β = 110.11
c = 36.49 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2003-02-05
  • Released Date: 2003-02-25
  • Deposition author(s): Cardin, C.J., Thorpe, J.H., Gale, B.C., Teixeira, S.C.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4