Crystal structure of Fab fragment of antibody HyHEL-8 complexed with its antigen lysozyme DOI:10.2210/pdb1ndg/pdb

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Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Immune System/hydrolase Structure Weight: 60615.55 Molecule: antibody kappa light chain Polymer: 1 Type: protein Length: 214 Chains: A Fragment: light chain Details: first chain of Anti-Lysozyme Antibody HyHEL-8 Organism Mus musculus UniProtKB:   Protein Feature View | Search PDB | P01837     Molecule: immunoglobulin gamma 1 chain Polymer: 2 Type: protein Length: 210 Chains: B Details: second chain of Anti-Lysozyme Antibody HyHEL-8 Organism Mus musculus Gene Name Igh-1a UniProtKB:   Protein Feature View | Search PDB | P01865     Molecule: Lysozyme C Polymer: 3 Type: protein Length: 129 Chains: C EC#: 3.2.1.17    Mutation: R61A Organism Gallus gallus Gene Name LYZ UniProtKB:   Protein Feature View | Search PDB | P00698         Source Hide Polymer: 1 Scientific Name: Mus musculus   Taxonomy   Common Name: House mouse Expression System: Escherichia coli   Polymer: 2 Scientific Name: Mus musculus   Taxonomy   Common Name: House mouse Expression System: Escherichia coli   Polymer: 3 Scientific Name: Gallus gallus   Taxonomy   Common Name: Chicken Expression System: Saccharomyces cerevisiae       Related PDB Entries Hide Identifier Details 1DQJ    1DQM    1DQQ    1NBY    1NBZ    1NDM        Ligand Chemical Component Hide Identifier Formula Name Interactions ACY Search  Download  C2 H4 O2 ACETIC ACID   Ligand Explorer     External Domain Annotations Hide SCOP Classification v1.75: 5 Domains - data from SCOP   CATH Classification v3.4.0: 5 Domains - data from CATH   Pfam Classification: 11 Domains - data from Pfam   GO Terms: 13 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Mariuzza, R.A.,  Li, Y.,  Li, H.,  Yang, F.,  Smith-Gill, S.J. Deposition:   2002-12-09 Release:   2003-06-03 Last Modified (REVDAT):   2009-02-24     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   1.90 R-Value: 0.206 (obs.) R-Free: 0.249 Space Group: P 42 21 2 Unit Cell:   Length [Å] Angles [°] a = 89.87 α = 90.00  b = 89.87 β = 90.00  c = 148.96 γ = 90.00      Molecule of the Month Hide Epidermal Growth Factor Nanobodies PDB Pioneers Antibodies Hemagglutinin Lysozyme