1N7Z

Structure and location of gene product 8 in the bacteriophage T4 baseplate

Structural Biology Knowledgebase: 1N7Z SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.213

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1N7Z

Classification: Viral protein

Total Structure Weight: 155482.75

Macromolecule Entities
Molecule Chains Length Organism Details
baseplate structural protein gp8 A, B, C, D 334 Enterobacteria phage t4 sensu lato Mutation: M21M, M71M, M75M, M76M, M85M, M141M, M167M, M303M, M309M, M312M, M320M, M322M
Gene Name(s): 8
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CL
Query on CL

A, B, C, D CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.213
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 66.39 α = 110.96
b = 78.47 β = 97.60
c = 88.23 γ = 111.39

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-11-18
  • Released Date: 2003-06-10
  • Deposition author(s): Leiman, P.G., Shneider, M.M., Kostyuchenko, V.A., Chipman, P.R., Mesyanzhinov, V.V., Rossmann, M.G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4