RCSB Protein Data Bank - RCSB PDB - 1N2V Structure Summary

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Crystal Structure of TGT in complex with 2-Butyl-5,6-dihydro-1H-imidazo[4,5-d]pyridazine-4,7-dione

DOI:10.2210/pdb1n2v/pdb

1N2V

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Primary Citation

Related Citations in PDB Entry (REMARK 1) Hide

Molecular Description

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Source

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Polymer: 1

Scientific Name:

Zymomonas mobilis

Taxonomy

Expression System:

Escherichia coli bl21(de3)

Related PDB Entries

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Identifier	Details
1ENU	A New Target For Shigellosis: Rational Design and Crystallographic Studies Of Inhibitors Of tRNA-Guanine Transglycosylase
1PUD	Apo-structure of tRNA-Guanine Transglycosylase

Ligand Chemical Component

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Identifier	Formula	Name	Interactions
BDI Search Download	C₉ H₁₂ N₄ O₂	2-BUTYL-5,6-DIHYDRO-1H-IMIDAZO[4,5-D]PYRIDAZINE- 4,7-DIONE		Ligand Explorer
ZN Search Download	Zn	ZINC ION		Ligand Explorer

External Ligand Annotations

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Identifier

Binding Affinity (Sequence Identity %)

Ki:	83000 nM (99)	- data from BindingDB
Ki:	83000 nM	- data from BindingMOAD
Ki:	83000 nM	- data from PDBbind

External Domain Annotations Hide
SCOP Classification v1.75: 1 Domain - data from SCOP

CATH Classification v3.4.0: 1 Domain - data from CATH

Pfam Classification: 1 Domain - data from Pfam

GO Terms: 6 Terms - data from GO
Structural Biology Knowledgebase Data Hide

Data in orange boxes are gathered from external resources (when available).

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Biological Assembly 1

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Biological assembly 1 assigned by authors

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Deposition Summary

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Authors: Brenk, R., Naerum, L., Graedler, U., Gerber, H.-D., Garcia, G.A., Reuter, K., Stubbs, M.T., Klebe, G.

Deposition:	2002-10-24
Release:	2003-04-08
Last Modified (REVDAT):	2011-07-13

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2011-07-13
Biological assembly

2011-07-13
Version format compliance

Experimental Details

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Method: X-RAY DIFFRACTION
Exp. Data:
Structure Factors
EDS

Unit Cell:
	Length [Å]	Angles [°]
	a = 91.06	α = 90.00
	b = 64.38	β = 96.50
	c = 70.77	γ = 90.00