structural model of human decay-accelerating factor bound to echovirus 7 from cryo-electron microscopy
1M11
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Virus/receptor  [ VIPERdb   ]
    Structure Weight: 113407.60
    Molecule: decay-accelerating factor
    Polymer: 1 Type: protein Length: 243
    Chains: R
    Fragment: four SCR domains 1 to 4
    Organism: Homo sapiens
    Gene Names: CR DAF Gene View for CD55
    UniProtKB: Search PDB | P08174   Protein Feature View
    Molecule: COAT PROTEIN VP1
    Polymer: 2 Type: protein Length: 278
    Chains: 1
    Organism: Echovirus E7
    UniProtKB: Search PDB | Q914E0   Protein Feature View
    Molecule: COAT PROTEIN VP2
    Polymer: 3 Type: protein Length: 254
    Chains: 2
    Organism: Echovirus E7
    UniProtKB: Search PDB | Q914E0   Protein Feature View
    Molecule: COAT PROTEIN VP3
    Polymer: 4 Type: protein Length: 238
    Chains: 3
    Organism: Echovirus E7
    UniProtKB: Search PDB | Q914E0   Protein Feature View
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Pichia pastoris  
    Polymer: 2
    Scientific Name: Human echovirus 7   Taxonomy   Expression System: Homo sapiens  
    Polymer: 3
    Scientific Name: Human echovirus 7   Taxonomy   Expression System: Homo sapiens  
    Polymer: 4
    Scientific Name: Human echovirus 7   Taxonomy   Expression System: Homo sapiens  
     
  •   Related PDB Entries Hide
    Identifier Details
    1COV   Coxsackievirus B3 Coat Protein 
    1EV1   Echovirus 1 
    1G40   Crystal Structure Of A Complement Protein 
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
No info available for origin of biological assembly
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  •   Deposition Summary Hide
    Authors:   He, Y.,  Lin, F.,  Chipman, P.R.,  Bator, C.M.,  Baker, T.S.,  Shoham, M.,  Kuhn, R.J.,  Medof, M.E.,  Rossmann, M.G.

    Deposition:   2002-06-17
    Release:   2002-08-28
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
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    2011-07-13
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  •   Experimental Details Hide
    Method:   ELECTRON MICROSCOPY
    Exp. Data:
    N/A EM Resolution [Å]: 16.0
    Aggregation State: PARTICLE
    Symmetry Type: ICOSAHEDRAL Reconstruction Method: SINGLE PARTICLE
    Specimen Type: VITREOUS ICE (CRYO EM)