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Structure of a HIF-1a-pVHL-ElonginB-ElonginC Complex
1LM8
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transcription
    Structure Weight: 44977.44
    Molecule: ELONGIN B
    Polymer: 1 Type: protein Length: 118
    Chains: B
    Organism Homo sapiens
    Gene Name TCEB2
    UniProtKB:   Protein Feature View | Search PDB | Q15370  
    Molecule: ELONGIN C
    Polymer: 2 Type: protein Length: 96
    Chains: C
    Organism Homo sapiens
    Gene Name TCEB1
    UniProtKB:   Protein Feature View | Search PDB | Q15369  
    Molecule: Von Hippel-Lindau disease tumor suppressor
    Polymer: 3 Type: protein Length: 160
    Chains: V
    Organism Homo sapiens
    Gene Name VHL
    UniProtKB:   Protein Feature View | Search PDB | P40337  
    Molecule: Hypoxia-inducible factor 1 alpha
    Polymer: 4 Type: protein Length: 20
    Chains: H
    Fragment: Residues 556-575
    Organism Homo sapiens
    Gene Names HIF1A BHLHE78 MOP1 PASD8
    UniProtKB:   Protein Feature View | Search PDB | Q16665  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 3
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 4
    Scientific Name: Synthetic construct (Homo sapiens)   Taxonomy    
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    HYP
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    HYP C5 H9 N O3 PRO lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Min, J-H,  Yang, H.,  Ivan, M.,  Gertler, F.,  Kaelin JR., W.G.,  Pavletich, N.P.

    Deposition:   2002-04-30
    Release:   2002-06-12
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   1.85
    R-Value: 0.196 (work)
    R-Free: 0.236
    Space Group: P 43 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 59.50 α = 90.00 
    b = 59.50 β = 90.00 
    c = 245.40 γ = 90.00