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Crystal Structure of a Zif23-GCN4 Chimera Bound to DNA
DOI:10.2210/pdb1llm/pdb   NDB ID: PD0312
1LLM
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transcription/dna
    Structure Weight: 29305.52
    Molecule: 5'-D(*TP*CP*CP*CP*AP*CP*GP*CP*GP*TP*GP*GP*G)-3'
    Polymer: 1 Type: dna Length: 13
    Chains: A, B
    Molecule: chimera of Zif23-GCN4
    Polymer: 2 Type: protein Length: 88
    Chains: C, D
    Details: The Zif23 section of the chimera is residues 2-50 and is derived from Zif268. The GCN4 section is residues 60-88.
    Organism: Saccharomyces cerevisiae Mus musculus
    Gene Names: GCN4 AAS3 ARG9 YEL009C Egr1 Egr-1 Krox-24
    UniProtKB: Protein Feature View | Search PDB | P03069  

    UniProtKB: Protein Feature View | Search PDB | P08046  
     
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  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Mus musculus, saccharomyces cerevisiae   Taxonomy   Common Name: House mouse, baker's yeast Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1AAY  Zif268/DNA structure at 1.6 angstroms 
    1G2D  Zinc finger structure with interfinger interactions 
    1G2F  Zinc finger structure with interfinger interactions 
    1YSA  GCN4/DNA(AP-1) structure 
    1ZAA  Zif268/DNA structure at 2.2 angstroms 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    ZN
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    ZN Zn
    ZINC ION
     
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  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: PD0312
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Wolfe, S.A.,  Grant, R.A.,  Pabo, C.O.

    Deposition:   2002-04-29
    Release:   2003-09-30
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   1.50
    R-Value: 0.216 (work)
    R-Free: 0.234
    Space Group: P 31 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 87.40 α = 90.00 
    b = 87.40 β = 90.00 
    c = 118.69 γ = 120.00