LIGAND BINDING DOMAIN OF THE HUMAN PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA IN COMPLEX WITH A SYNTHETIC AGONIST DOI:10.2210/pdb1knu/pdb

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Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: DNA Binding Protein Structure Weight: 63046.88 Molecule: PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA Polymer: 1 Type: protein Length: 274 Chains: A, B Fragment: LIGAND BINDING DOMAIN Organism Homo sapiens Gene Names PPARG NR1C3 UniProtKB:   Protein Feature View | Search PDB | P37231         Source Hide Polymer: 1 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli bl21(de3)       Related PDB Entries Hide Identifier Details 1PRG  1PRG contains the same protein.  2PRG  2PRG contains the same protein complexed with BRL49653.      Ligand Chemical Component Hide Identifier Formula Name Interactions YPA Search  Download  C25 H25 N O4 (S)-3-(4-(2-CARBAZOL-9-YL-ETHOXY)-PHENYL)- 2-ETHOXY-PROPIONIC ACID   Ligand Explorer     External Ligand Annotations Hide Identifier   Binding Affinity (Sequence Identity %) YPA Search  Download  EC50: 170 nM (100) - data from BindingDB   Kd: 170 nM (100) - data from BindingDB   N/A in BindingMoad N/A in PDBbind     External Domain Annotations Hide SCOP Classification v1.75: 2 Domains - data from SCOP   CATH Classification v3.4.0: 2 Domains - data from CATH   Pfam Classification: 1 Domain - data from Pfam       Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Svensson, L.A.,  Mortensen, S.B.,  Fleckner, J.,  Woeldike, H.F. Deposition:   2001-12-19 Release:   2002-12-19 Last Modified (REVDAT):   2009-02-24     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.50 R-Value: 0.224 (work) R-Free: 0.264 Space Group: C 2 Unit Cell:   Length [Å] Angles [°] a = 92.27 α = 90.00  b = 63.44 β = 101.84  c = 119.24 γ = 90.00