1KLM

HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH BHAP U-90152

Structural Biology Knowledgebase: 1KLM SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.313
  • R-Value Work: 0.237

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1KLM

Classification: NUCLEOTIDYLTRANSFERASE

Total Structure Weight: 116451.86

Macromolecule Entities
Molecule Chains Length Organism Details
HIV-1 REVERSE TRANSCRIPTASE A 560 Human immunodeficiency virus 1 EC#: 2.7.7.49 IUBMB
Mutation: C280X
Gene Name(s): gag-pol
HIV-1 REVERSE TRANSCRIPTASE B 440 Human immunodeficiency virus 1 EC#: 2.7.7.49 IUBMB
Gene Name(s): gag-pol

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SPP
Query on SPP

A (1-(5-METHANSULPHONAMIDO-1H-INDOL-2-YL-CARBONYL)4- [METHYLAMINO)PYRIDINYL]PIPERAZINE
Delavirdine (Synonym)
C22 H28 N6 O3 S
WHBIGIKBNXZKFE-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
SPP IC50: 21 - >100000 nM (99 - 100) BindingDB

N/A in BindingMoad
N/A in PDBbind
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
CSD
Query on CSD
A L-PEPTIDE LINKING C3 H7 N O4 S CYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.313
  • R-Value Work: 0.237
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 136.80 α = 90.00
b = 109.40 β = 90.00
c = 72.00 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-03-17
  • Released Date: 1998-03-18
  • Deposition author(s): Ren, J., Esnouf, R.M., Stammers, D.K., Stuart, D.I.

Revision History

  • 2012-07-18
    Type: Non-polymer description | Details: Update synonym of SPP
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4