1IKT

LIGANDED STEROL CARRIER PROTEIN TYPE 2 (SCP-2) LIKE DOMAIN OF HUMAN MULTIFUNCTIONAL ENZYME TYPE 2 (MFE-2)

Structural Biology Knowledgebase: 1IKT SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.192

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1IKT

Classification: OXIDOREDUCTASE

Total Structure Weight: 14103.56

Macromolecule Entities
Molecule Chains Length Organism Details
ESTRADIOL 17 BETA-DEHYDROGENASE 4 A 120 Homo sapiens EC#: 1.1.1.62 IUBMB
Fragment: C-terminal domain, Residues 618-736
Gene Name(s): HSD17B4 Gene View EDH17B4 SDR8C1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
OXN
Query on OXN

A OXTOXYNOL-10
1, (Synonym)
C34 H62 O11
IVKNZCBNXPYYKL-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
OXN N/A in BindingDB
N/A in BindingMoad
Kd: 400000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.192
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 35.47 α = 90.00
b = 50.03 β = 90.00
c = 62.72 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-05-07
  • Released Date: 2001-11-14
  • Deposition author(s): Haapalainen, A.M., van Aalten, D.M.F., Glumoff, T.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4