1HF0

Crystal structure of the DNA-binding domain of Oct-1 bound to DNA as a dimer

Structural Biology Knowledgebase: 1HF0 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.294
  • R-Value Work: 0.239

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1HF0

Classification: TRANSCRIPTION

Total Structure Weight: 50157.88


Macromolecule Entities
Molecule Chains Length Organism Details
OCTAMER-BINDING TRANSCRIPTION FACTOR 1 A, B 159 Homo sapiens Fragment: DNA-BINDING DOMAIN
Mutation: C61S, C150S
Gene Name(s): POU2F1 Gene View OCT1 OTF1
Macromolecule Entities
Molecule Chains Length Organism Details
DNA 5'-D(*CP*AP*CP*AP*TP*TP*TP*GP*AP*AP*AP*GP*GP* CP*AP*AP*AP*TP*GP*GP*AP*G)-3' M 22 synthetic
DNA 5'-D(*CP*TP*CP*CP*AP*TP*TP*TP*GP*CP*CP*TP*TP* TP*CP*AP*AP*AP*TP*GP*TP*G)-3' N 22 synthetic


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.294
  • R-Value Work: 0.239
  • Space Group: P 62 2 2

Unit Cell:

Length (Å) Angle (°)
a = 131.25 α = 90.00
b = 131.25 β = 90.00
c = 116.50 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-11-27
  • Released Date: 2001-11-10
  • Deposition author(s): Remenyi, A., Tomilin, A., Pohl, E., Scholer, H.R., Wilmanns, M.

Revision History

  • 2012-11-14
    Type: Refinement description | Details: REMARK 3
  • 2012-11-14
    Type: Other | Details: REMARK 465,REMARK 470,REMARK 525,HEADER
  • 2012-11-14
    Type: Non-polymer description | Details: FORMUL
  • 2012-11-14
    Type: Geometry validation | Details: REMARK 500
  • 2012-11-14
    Type: Function and keywords | Details: KEYWDS
  • 2012-11-14
    Type: Sequence database correspondence | Details: SEQADV,DBREF
  • 2012-11-14
    Type: Data collection | Details: REMARK 200
  • 2012-11-14
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2012-11-14
    Type: Version format compliance | Details: REMARK 4