L116A MUTANT OF THE HOMING ENDONUCLEASE I-PPOI COMPLEXED TO HOMING SITE DNA.     DOI:10.2210/pdb1evw/pdb   NDB ID: PD0140

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Primary Citation       Molecular Description Hide Classification: Hydrolase/dna Structure Weight: 96051.78   Molecule: DNA (5'-D(*TP*GP*GP*CP*TP*AP*CP*CP*TP*TP*AP*A)-3') Polymer: 1 Type: polydeoxyribonucleotide Length: 12 Chains: E, G Other Details: DNA HOMING SITE; STRAND 1 Molecule: DNA (5'-D(P*GP*AP*GP*AP*GP*TP*CP*A)-3') Polymer: 2 Type: polydeoxyribonucleotide Length: 8 Chains: M, N Other Details: DNA HOMING SITE; STRAND 2 Molecule: DNA (5'-D(*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*A)-3') Polymer: 3 Type: polydeoxyribonucleotide Length: 12 Chains: F, H Molecule: DNA (5'-D(P*GP*GP*TP*AP*GP*CP*CP*A)-3') Polymer: 4 Type: polydeoxyribonucleotide Length: 8 Chains: O, P Molecule: I-PPOI HOMING ENDONUCLEASE Polymer: 5 Type: polypeptide(L) Length: 163 Chains: A, B, C, D Mutation: L116A       Source Hide Polymer: 1 Scientific Name: Synthetic construct   Polymer: 2 Scientific Name: Synthetic construct   Polymer: 3 Scientific Name: Synthetic construct   Polymer: 4 Scientific Name: Synthetic construct   Polymer: 5 Scientific Name: Physarum polycephalum Expression System: Escherichia coli         Related PDB Entries Hide Id Details 1A73  wild-type I-PpoI complexed to DNA homing site (product complex)  1CYQ  I-PpoI Substrate Complex (H98A Trapped)  1CZ0  I-PpoI Substrate Complex (Sodium Trapped)  1EVX  apo structure of I-PpoI        Ligand Chemical Component Hide Identifier Name Formula Interaction View Links MG     MAGNESIUM ION Mg Ligand Explorer ZN     ZINC ION Zn Ligand Explorer       Derived Data Hide SCOP Classification v1.75 - (4 Domains) CATH Classification v3.2.0 - (4 Domains) GO Terms - (5 Terms)     Reset Layout

Biological Assembly 1     More Images... View in Jmol Other Viewers close KiNG WebMol QuickPDB FirstGlance Kiosk SimpleViewer Protein Workshop Ligand Explorer Biological assembly 1 assigned by authors Biological assembly 2 assigned by authors         Deposition Summary Hide Authors:   Galburt, E.A.,   Jurica, M.S.,   Chevalier, B.S.,   Erho, D.,   Stoddard, B.L. Deposition:   2000-04-20 Release:   2000-08-03 Last Modified (REVDAT):   2009-02-24       Experimental Details Hide Method:   X-RAY DIFFRACTION Experimental Data:   N/A Resolution[Å]: 3.10 R-Value: 0.273 (work) R-Free: 0.320 Space Group: C 2 Unit Cell:   Length [Å] Angles [°] a = 182.00 α = 90.00  b = 73.10 β = 95.40  c = 92.70 γ = 90.00