1BHT

NK1 FRAGMENT OF HUMAN HEPATOCYTE GROWTH FACTOR

Structural Biology Knowledgebase: 1BHT SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.196

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1BHT

Classification: HEPARIN-BINDING DOMAIN

Total Structure Weight: 41383.64

Macromolecule Entities
Molecule Chains Length Organism Details
HEPATOCYTE GROWTH FACTOR A, B 176 Homo sapiens Fragment: NK1 FRAGMENT, HEPARIN BINDING DOMAIN PLUS C-MET BINDING DOMAIN
Details: HEPES BUFFER MOLECULE BOUND IN KRINGLE BINDING POCKET
Gene Name(s): HGF Gene View HPTA

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EPE
Query on EPE

A, B 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
HEPES (Synonym)
C8 H18 N2 O4 S
JKMHFZQWWAIEOD-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.196
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 88.32 α = 90.00
b = 88.32 β = 90.00
c = 117.28 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-06-10
  • Released Date: 1998-11-04
  • Deposition author(s): Ultsch, M.H., Lokker, N.A., Godowski, P.J., De Vos, A.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4