1B93

METHYLGLYOXAL SYNTHASE FROM ESCHERICHIA COLI

Structural Biology Knowledgebase: 1B93 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.202
  • R-Value Work: 0.181

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1B93

Classification: LYASE

Total Structure Weight: 51230.25

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (METHYLGLYOXAL SYNTHASE) A, B, C 152 Escherichia coli EC#: 4.2.3.3 IUBMB
Gene Name(s): mgsA yccG b0963 JW5129

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

B PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FMT
Query on FMT

A, B, C FORMIC ACID
C H2 O2
BDAGIHXWWSANSR-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.202
  • R-Value Work: 0.181
  • Space Group: P 65 2 2

Unit Cell:

Length (Å) Angle (°)
a = 123.34 α = 90.00
b = 123.34 β = 90.00
c = 155.98 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-02-19
  • Released Date: 1999-03-16
  • Deposition author(s): Saadat, D., Harrison, D.H.T.

Revision History

  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4