1ABY

CYANOMET RHB1.1 (RECOMBINANT HEMOGLOBIN)

Structural Biology Knowledgebase: 1ABY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.278
  • R-Value Work: 0.175

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1ABY

Classification: OXYGEN TRANSPORT

Total Structure Weight: 64817.13

Macromolecule Entities
Molecule Chains Length Organism Details
HEMOGLOBIN A 283 Homo sapiens Gene Name(s): HBA1 Gene View HBA2 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
HEMOGLOBIN B, D 146 Homo sapiens Mutation: N108K
Gene Name(s): HBB Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEM
Query on HEM

A, B, D PROTOPORPHYRIN IX CONTAINING FE
HEME (Synonym)
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CYN
Query on CYN

A, B, D CYANIDE ION
C N
XFXPMWWXUTWYJX-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.278
  • R-Value Work: 0.175
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 102.54 α = 90.00
b = 115.17 β = 90.00
c = 56.70 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-01-29
  • Released Date: 1998-02-25
  • Deposition author(s): Kundrot, C.E., Kroeger, K.S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4