NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
NDP is a Ligand Of Interest in 5VG6 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5VG6_NDP_E_401 | 92% | 67% | 0.078 | 0.97 | 0.47 | 0.78 | - | 2 | 0 | 0 | 100% | 1 |
| 5VG6_NDP_A_401 | 87% | 65% | 0.1 | 0.973 | 0.64 | 0.69 | - | 1 | 0 | 0 | 100% | 1 |
| 5VG6_NDP_C_401 | 87% | 64% | 0.106 | 0.978 | 0.6 | 0.74 | - | 1 | 0 | 0 | 100% | 1 |
| 5VG6_NDP_I_401 | 86% | 64% | 0.106 | 0.974 | 0.6 | 0.74 | - | 1 | 0 | 0 | 100% | 1 |
| 5VG6_NDP_J_401 | 85% | 61% | 0.108 | 0.974 | 0.65 | 0.81 | - | 2 | 0 | 0 | 100% | 1 |
| 5VG6_NDP_B_401 | 75% | 69% | 0.113 | 0.945 | 0.5 | 0.66 | - | 1 | 0 | 0 | 100% | 1 |
| 5VG6_NDP_H_401 | 62% | 68% | 0.127 | 0.92 | 0.49 | 0.71 | - | 2 | 0 | 0 | 100% | 1 |
| 5VG6_NDP_G_401 | 61% | 68% | 0.142 | 0.932 | 0.53 | 0.69 | - | 2 | 0 | 0 | 100% | 1 |
| 5VG6_NDP_D_401 | 47% | 69% | 0.146 | 0.884 | 0.52 | 0.64 | - | 1 | 1 | 0 | 100% | 1 |
| 5VG6_NDP_F_401 | 35% | 70% | 0.179 | 0.868 | 0.5 | 0.64 | - | 1 | 1 | 0 | 100% | 1 |
| 1US0_NDP_A_318 | 100% | 46% | 0.027 | 0.998 | 1.21 | 0.91 | 3 | - | 4 | 0 | 100% | 1 |
| 2I16_NDP_A_319 | 100% | 46% | 0.028 | 0.998 | 1.2 | 0.9 | 3 | 1 | 0 | 0 | 100% | 1 |
| 2I17_NDP_A_319 | 100% | 46% | 0.029 | 0.998 | 1.22 | 0.89 | 3 | - | 0 | 0 | 100% | 1 |
| 2PF8_NDP_A_318 | 100% | 46% | 0.031 | 0.998 | 1.17 | 0.93 | 3 | - | 4 | 0 | 100% | 1 |
| 2PFH_NDP_A_318 | 100% | 29% | 0.03 | 0.998 | 1.79 | 1.2 | 8 | 7 | 4 | 0 | 100% | 1 |
