PD2: PYRIDINE-2,4-DICARBOXYLIC ACID
PD2 is a Ligand Of Interest in 4DIQ designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4DIQ_PD2_B_702 | 59% | 15% | 0.195 | 0.979 | 1.91 | 2.08 | 4 | 5 | 1 | 0 | 100% | 1 |
4DIQ_PD2_A_701 | 51% | 26% | 0.217 | 0.972 | 1.1 | 2.05 | - | 6 | 0 | 0 | 100% | 1 |
6I9L_PD2_A_502 | 96% | 28% | 0.072 | 0.983 | 1.57 | 1.46 | 3 | 2 | 0 | 0 | 100% | 1 |
4NHK_PD2_A_702 | 92% | 43% | 0.082 | 0.971 | 1.1 | 1.15 | - | 1 | 0 | 0 | 100% | 1 |
5JTC_PD2_A_802 | 89% | 17% | 0.099 | 0.98 | 2.33 | 1.49 | 2 | 1 | 0 | 0 | 100% | 1 |
2JIG_PD2_A_1254 | 89% | 40% | 0.086 | 0.965 | 1.32 | 1.1 | 2 | 2 | 2 | 0 | 100% | 1 |
5A3W_PD2_A_1757 | 86% | 6% | 0.092 | 0.961 | 2.91 | 2.3 | 1 | 3 | 0 | 0 | 100% | 1 |