NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
NAP is a Ligand Of Interest in 3PEF designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3PEF_NAP_E_301 | 96% | 30% | 0.078 | 0.987 | 1.72 | 1.21 | 4 | 3 | 0 | 0 | 100% | 1 |
3PEF_NAP_D_301 | 95% | 29% | 0.082 | 0.984 | 1.66 | 1.32 | 5 | 7 | 1 | 0 | 100% | 1 |
3PEF_NAP_H_301 | 94% | 30% | 0.082 | 0.983 | 1.64 | 1.31 | 4 | 4 | 0 | 0 | 100% | 1 |
3PEF_NAP_A_301 | 94% | 29% | 0.087 | 0.987 | 1.65 | 1.34 | 4 | 4 | 0 | 0 | 100% | 1 |
3PEF_NAP_C_301 | 93% | 30% | 0.082 | 0.976 | 1.68 | 1.25 | 4 | 3 | 4 | 0 | 100% | 1 |
3PEF_NAP_G_301 | 90% | 31% | 0.098 | 0.98 | 1.65 | 1.2 | 3 | 3 | 2 | 0 | 100% | 1 |
3PEF_NAP_B_301 | 89% | 31% | 0.094 | 0.975 | 1.65 | 1.2 | 3 | 3 | 0 | 0 | 100% | 1 |
3PEF_NAP_F_301 | 85% | 32% | 0.101 | 0.968 | 1.65 | 1.19 | 3 | 2 | 1 | 0 | 100% | 1 |
2X9G_NAP_B_1269 | 100% | 46% | 0.031 | 0.997 | 0.96 | 1.14 | 1 | 5 | 0 | 0 | 100% | 1 |
2J8T_NAP_A_1316 | 100% | 49% | 0.033 | 0.996 | 0.97 | 1.01 | 3 | 2 | 1 | 0 | 100% | 1 |
3LQL_NAP_A_500 | 100% | 44% | 0.035 | 0.996 | 1.13 | 1.07 | 3 | 4 | 1 | 0 | 100% | 1 |
3LD5_NAP_A_500 | 100% | 33% | 0.033 | 0.993 | 1.34 | 1.4 | 7 | 6 | 2 | 0 | 100% | 1 |
3M4H_NAP_A_500 | 100% | 45% | 0.037 | 0.997 | 1.12 | 1.04 | 5 | 3 | 1 | 0 | 100% | 1 |