CAP: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE
CAP is a Ligand Of Interest in 3KDO designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3KDO_CAP_I_600 | 89% | 57% | 0.104 | 0.982 | 0.84 | 0.81 | - | - | 0 | 0 | 100% | 1 |
3KDO_CAP_F_600 | 81% | 57% | 0.123 | 0.976 | 0.85 | 0.8 | - | - | 0 | 0 | 100% | 1 |
3KDO_CAP_D_600 | 81% | 57% | 0.128 | 0.98 | 0.86 | 0.78 | - | - | 0 | 0 | 100% | 1 |
3KDO_CAP_B_600 | 68% | 57% | 0.161 | 0.974 | 0.85 | 0.78 | - | - | 1 | 0 | 100% | 1 |
3KDO_CAP_G_600 | 68% | 57% | 0.165 | 0.977 | 0.86 | 0.8 | - | - | 1 | 0 | 100% | 1 |
3KDO_CAP_C_600 | 61% | 58% | 0.179 | 0.968 | 0.84 | 0.76 | - | - | 1 | 0 | 100% | 1 |
3KDO_CAP_A_600 | 56% | 57% | 0.173 | 0.945 | 0.86 | 0.8 | - | - | 0 | 0 | 100% | 1 |
3KDO_CAP_J_600 | 46% | 56% | 0.211 | 0.949 | 0.88 | 0.8 | - | - | 0 | 0 | 100% | 1 |
3KDO_CAP_E_600 | 32% | 56% | 0.241 | 0.916 | 0.88 | 0.8 | - | - | 1 | 0 | 100% | 1 |
3KDO_CAP_H_600 | 32% | 59% | 0.218 | 0.891 | 0.83 | 0.74 | - | - | 0 | 0 | 100% | 1 |
5IU0_CAP_A_502 | 100% | 55% | 0.041 | 0.996 | 0.93 | 0.82 | - | - | 0 | 0 | 100% | 1 |
5MZ2_CAP_A_902 | 100% | 58% | 0.04 | 0.995 | 0.75 | 0.86 | - | - | 0 | 0 | 100% | 1 |
1WDD_CAP_E_2001 | 100% | 51% | 0.039 | 0.99 | 0.88 | 1.02 | - | 1 | 0 | 0 | 100% | 1 |
8BDB_CAP_O_502 | 100% | 55% | 0.045 | 0.989 | 0.78 | 0.94 | - | - | 0 | 0 | 100% | 1 |
2V6A_CAP_B_1477 | 100% | 54% | 0.048 | 0.99 | 0.94 | 0.85 | - | - | 0 | 0 | 100% | 1 |