NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 2YP8 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2YP8_NAG_A_1063 | 31% | 65% | 0.206 | 0.876 | 0.47 | 0.85 | - | - | 0 | 0 | 100% | 0.9333 |
2YP8_NAG_A_1285 | 30% | 48% | 0.208 | 0.874 | 0.78 | 1.2 | - | 2 | 0 | 0 | 100% | 0.9333 |
2YP8_NAG_A_1038 | 19% | 62% | 0.198 | 0.788 | 0.38 | 1.04 | - | 1 | 0 | 0 | 100% | 0.9333 |
2YP8_NAG_A_1133 | 10% | 57% | 0.226 | 0.734 | 0.57 | 1.07 | - | 1 | 0 | 1 | 100% | 0.9333 |
2YP8_NAG_A_1126 | 3% | 64% | 0.409 | 0.758 | 0.58 | 0.79 | - | - | 0 | 0 | 100% | 0.9333 |
2YP8_NAG_A_1483 | 2% | 57% | 0.358 | 0.625 | 0.56 | 1.07 | - | 1 | 0 | 0 | 100% | 0.9333 |
4WE8_NAG_A_608 | 64% | 57% | 0.152 | 0.95 | 0.49 | 1.14 | - | 1 | 0 | 0 | 100% | 0.9333 |
2YP2_NAG_A_812 | 59% | 50% | 0.115 | 0.896 | 0.74 | 1.18 | 1 | 2 | 0 | 0 | 100% | 0.9333 |
4WE9_NAG_A_608 | 47% | 81% | 0.158 | 0.897 | 0.32 | 0.5 | - | - | 0 | 0 | 100% | 0.9333 |
4KVN_NAG_A_605 | 40% | 75% | 0.155 | 0.867 | 0.31 | 0.67 | - | 1 | 0 | 0 | 100% | 0.9333 |
2YP7_NAG_A_802 | 37% | 66% | 0.211 | 0.911 | 0.41 | 0.88 | - | - | 0 | 0 | 100% | 0.9333 |
1OC7_NAG_A_500 | 100% | 60% | 0.04 | 0.991 | 0.61 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC6_NAG_A_500 | 100% | 67% | 0.041 | 0.988 | 0.46 | 0.8 | - | 1 | 0 | 0 | 100% | 0.9333 |
1UWC_NAG_A_262 | 100% | 54% | 0.046 | 0.99 | 0.81 | 0.95 | - | - | 0 | 0 | 100% | 0.9333 |
6ZE6_NAG_B_703 | 100% | 52% | 0.044 | 0.984 | 0.78 | 1.07 | - | 2 | 0 | 0 | 100% | 0.8667 |
6ZE2_NAG_B_704 | 99% | 56% | 0.042 | 0.979 | 0.73 | 0.95 | - | 1 | 0 | 0 | 100% | 0.9333 |