KDM: deamino-alpha-neuraminic acid
KDM is a Ligand Of Interest in 2XZI designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2XZI_KDM_B_500 | 80% | 28% | 0.089 | 0.939 | 1.63 | 1.42 | 4 | 2 | 0 | 0 | 100% | 1 |
| 2XZI_KDM_A_500 | 63% | 28% | 0.116 | 0.913 | 1.61 | 1.43 | 3 | 2 | 0 | 0 | 100% | 1 |
| 2XZI_KDM_B_501 | 48% | 42% | 0.143 | 0.885 | 1.67 | 0.67 | 3 | - | 0 | 0 | 100% | 1 |
| 2XZI_KDM_A_501 | 12% | 45% | 0.246 | 0.774 | 1.5 | 0.68 | 3 | - | 0 | 0 | 100% | 1 |
| 7P1Q_KDM_A_501 | 100% | 48% | 0.048 | 0.99 | 1.05 | 0.98 | 2 | 1 | 0 | 0 | 100% | 1 |
| 7P1U_KDM_A_501 | 79% | 47% | 0.106 | 0.951 | 0.62 | 1.44 | - | 3 | 0 | 0 | 100% | 0.8 |
| 7P1O_KDM_X_502 | 36% | 19% | 0.157 | 0.849 | 1.48 | 2.14 | 3 | 4 | 1 | 0 | 100% | 1 |
| 7P1D_KDM_A_501 | 33% | 16% | 0.142 | 0.819 | 2.47 | 1.41 | 4 | 3 | 0 | 0 | 100% | 1 |
