Ligand validation:2CYD

LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE

LHG is a Ligand Of Interest in 2CYD designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
2CYD_LHG_F_5159	4%	46%	0.313	0.736	1.05	1.07	2	2	6	82%	0.8163
2CYD_LHG_B_1158	4%	49%	0.402	0.783	1.01	0.98	2	3	0	100%	1
2CYD_LHG_C_2159	4%	46%	0.344	0.753	1.06	1.07	2	2	6	82%	0.8163
2CYD_LHG_H_7159	4%	46%	0.38	0.784	1.06	1.07	2	2	6	82%	0.8163
2CYD_LHG_G_6159	4%	46%	0.352	0.749	1.06	1.06	2	2	8	82%	0.8163
2CYD_LHG_E_4158	4%	48%	0.378	0.74	0.99	1.01	2	4	0	100%	1
2CYD_LHG_G_6158	3%	48%	0.388	0.748	1.01	1	2	4	0	100%	1
2CYD_LHG_J_9158	3%	48%	0.407	0.763	0.98	1.04	2	4	0	100%	1
2CYD_LHG_D_3158	3%	49%	0.37	0.71	0.99	1	2	3	0	100%	1
2CYD_LHG_F_5158	3%	48%	0.401	0.74	1.01	1.02	2	4	0	100%	1
2CYD_LHG_I_8158	2%	48%	0.419	0.729	1	1	2	4	0	100%	1
2CYD_LHG_C_2158	2%	49%	0.424	0.733	1.02	0.96	2	2	0	100%	1
2CYD_LHG_A_558	2%	48%	0.431	0.726	0.99	1.01	2	4	0	100%	1
2CYD_LHG_I_8159	2%	45%	0.395	0.699	1.08	1.09	2	2	4	82%	0.8163
2CYD_LHG_J_9159	2%	47%	0.413	0.698	1.08	0.99	2	2	7	82%	0.8163
2CYD_LHG_H_7158	2%	48%	0.426	0.664	1	1.02	2	4	0	100%	1
2CYD_LHG_A_559	1%	46%	0.41	0.67	1.06	1.07	2	2	7	82%	0.8163
2CYD_LHG_B_1159	1%	45%	0.425	0.649	1.07	1.07	2	2	5	82%	0.8163
2CYD_LHG_E_4159	1%	46%	0.442	0.583	1.06	1.07	2	2	5	82%	0.8163
2CYD_LHG_D_3159	1%	45%	0.482	0.621	1.07	1.07	2	2	7	82%	0.8163
2DB4_LHG_I_203	8%	44%	0.228	0.724	1.08	1.11	2	3	0	82%	0.8163
2BL2_LHG_C_1158	3%	49%	0.263	0.617	0.98	0.98	2	2	2	100%	1
5V2C_LHG_l_101	98%	46%	0.068	0.987	0.91	1.18	2	3	0	100%	1
7RF1_LHG_D_410	91%	47%	0.087	0.974	0.92	1.14	2	5	0	100%	1
8IRC_LHG_L_101	91%	48%	0.092	0.978	0.88	1.15	2	4	0	100%	1
5B66_LHG_l_102	91%	54%	0.084	0.969	0.78	1	2	2	0	100%	1
4IL6_LHG_B_621	91%	52%	0.088	0.973	0.93	0.92	2	2	0	100%	1

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.

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2CYD

LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE

LHG is a Ligand Of Interest in 2CYD designated by the RCSB