UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 1NHE designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
1NHE_UDP_D_810 12% 18% 0.272 0.8022.12 1.59 5 550100%1
1NHE_UDP_B_809 5% 17% 0.309 0.732.19 1.6 5 520100%1
1NKH_UDP_D_810 95% 20% 0.077 0.9791.9 1.67 5 530100%1
2FYD_UDP_D_528 83% 23% 0.102 0.9621.55 1.79 4 1120100%1
1PZY_UDP_B_407 46% 38% 0.162 0.8971.33 1.15 3 210100%0.952
2FYC_UDP_B_405 21% 34% 0.189 0.81.21 1.47 2 800100%1
1O23_UDP_B_811 8% 33% 0.262 0.741.26 1.47 2 710100%1
4PHR_UDP_A_301 100% 43% 0.042 0.9890.84 1.41 - 400100%1
2B69_UDP_A_900 100% 47% 0.046 0.9921.19 0.9 2 100100%1
1GX4_UDP_A_401 100% 20% 0.046 0.9912.39 1.19 4 300100%1
5GY7_UDP_B_401 99% 45% 0.047 0.9870.98 1.18 1 500100%1
3U2V_UDP_B_270 99% 35% 0.049 0.9891.12 1.52 2 600100%1