7LL7
[2]Catenane From MccJ25 Variant G12C G21C
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-1H TOCSY | 1.03 mM [2]catenane | 95% H2O/5% D2O | 0 | 6 | 1 bar | 295 | Bruker AVANCE III 800 |
| 2 | 1D 1H | 1.03 mM [2]catenane | 95% H2O/5% D2O | 0 | 6 | 1 bar | 295 | Bruker AVANCE III 800 |
| 3 | 2D 1H-1H NOESY | 1.03 mM [2]catenane | 95% H2O/5% D2O | 0 | 6 | 1 bar | 295 | Bruker AVANCE III 800 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE III | 800 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| molecular dynamics | NAMD | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 5 | chemical shift assignment | MestreLab (Mnova / MestReNova / MestReC) | 14.1.0. | Mestrelab Research |
| 1 | structure calculation | CYANA | 2.1 | Guntert, Mumenthaler and Wuthrich |
| 2 | geometry optimization | NAMD | 2.13 | James C. Phillips, David J. Hardy, Julio D. C. Maia, John E. Stone, Joao V. Ribeiro, Rafael C. Bernardi, Ronak Buch, Giacomo Fiorin, Jerome Henin, Wei Jiang, Ryan McGreevy, Marcelo C. R. Melo, Brian K. Radak, Robert D. Skeel, Abhishek Singharoy, Yi Wang, Benoit Roux, Aleksei Aksimentiev, Zaida Luthey-Schulten, Laxmikant V. Kale, Klaus Schulten, Christophe Chipot, and Emad Tajkhorshid |
