7BK5

PfCopC mutant - E27A

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP	8.5	298	2.52 M ammonium phosphate dibasic, 0.09 M Tris, 3% (w/v) D-sorbitol

Crystal Properties
Matthews coefficient	Solvent content
2.12	41.87

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 27	α = 90
b = 76.91	β = 90
c = 81.95	γ = 90

Symmetry
Space Group	C 2 2 21

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS3 X 2M		2020-10-07	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	ESRF BEAMLINE ID23-2	0.87313	ESRF	ID23-2

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	Rrim I (All)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.54	50	99.9	0.01011	0.998	10.11	5.47		13059

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	Rrim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.54	1.58			0.1753	0.525

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	6NFQ	1.54	40.975	13059	647	99.939	0.207	0.2055	0.2339	28.664

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
1.918			-0.915		-1.003

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	46.238
r_dihedral_angle_4_deg	17.732
r_dihedral_angle_3_deg	16.149
r_lrange_it	7.771
r_lrange_other	7.564
r_dihedral_angle_1_deg	6.143
r_scangle_it	5.368
r_scangle_other	5.274
r_mcangle_other	3.982
r_mcangle_it	3.981
r_scbond_it	3.553
r_scbond_other	3.489
r_mcbond_it	2.785
r_mcbond_other	2.772
r_angle_refined_deg	1.748
r_angle_other_deg	1.291
r_symmetry_xyhbond_nbd_refined	0.28
r_xyhbond_nbd_refined	0.269
r_symmetry_xyhbond_nbd_other	0.256
r_nbd_other	0.247
r_nbd_refined	0.222
r_symmetry_nbd_other	0.194
r_symmetry_nbd_refined	0.181
r_metal_ion_refined	0.178
r_nbtor_refined	0.157
r_symmetry_nbtor_other	0.082
r_chiral_restr	0.068
r_bond_refined_d	0.01
r_gen_planes_refined	0.008
r_bond_other_d	0.001
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	708
Nucleic Acid Atoms
Solvent Atoms	92
Heterogen Atoms	10

Software

Software
Software Name	Purpose
REFMAC	refinement
XDS	data reduction
XSCALE	data scaling
MOLREP	phasing