6XEH
Solution NMR Structure of DE NOVO DESIGNED Rossmann 2x3 Fold Protein r2x3_168, Northeast Structural Genomics Consortium (NESG) Target OR386
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 0.6 mM [U-13C; U-15N] OR386 | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 800 |
2 | 2D 1H-13C HSQC aliphatic | 0.6 mM [U-13C; U-15N] OR386 | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 800 |
3 | 2D 1H-13C HSQC aromatic | 0.6 mM [U-13C; U-15N] OR386 | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 800 |
4 | 3D HNCO | 0.6 mM [U-13C; U-15N] OR386 | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 800 |
5 | 3D HNCACB | 0.6 mM [U-13C; U-15N] OR386 | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 800 |
6 | 3D CBCA(CO)NH | 0.6 mM [U-13C; U-15N] OR386 | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 800 |
7 | 3D HCCH-TOCSY | 0.6 mM [U-13C; U-15N] OR386 | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 800 |
8 | 3D SIMUTANEOUS 1H, 15N, 13C NOESY | 0.6 mM [U-13C; U-15N] OR386 | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 800 |
9 | 2D 1H-13C HSQC aliphatic | 0.6 mM [U-10% 13C; U-100% 15N] OR386 | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 800 |
10 | 2D 1H-15N HSQC | 0.6 mM [U-10% 13C; U-100% 15N] OR386 | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE 600 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE III | 800 |
2 | Bruker | AVANCE | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | CNS | |
torsion angle dynamics | CYANA |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
2 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
5 | structure calculation | ASDP | Huang, Montelione | |
3 | chemical shift assignment | AutoAssign | Zimmerman, Moseley, Kulikowski and Montelione | |
4 | peak picking | XEASY | Bartels et al. | |
6 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax |