5OCZ

Free DNA_hairpin polyamides studies

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-1H NOESY	1.3 mM NA DNA (5'-D(*CP*GP*AP*TP*GP*TP*AP*CP*AP*TP*CP*G)-3')	90% H2O/10% D2O	100mM phoshate mM	7.4	1 atm	298	Bruker AVANCE 600
2	2D 1H-1H TOCSY	1.3 mM NA DNA (5'-D(*CP*GP*AP*TP*GP*TP*AP*CP*AP*TP*CP*G)-3')	90% H2O/10% D2O	100mM phoshate mM	7.4	1 atm	298	Bruker AVANCE 600
3	2D DQF-COSY	1.3 mM NA DNA (5'-D(*CP*GP*AP*TP*GP*TP*AP*CP*AP*TP*CP*G)-3')	90% H2O/10% D2O	100mM phoshate mM	7.4	1 atm	298	Bruker AVANCE 600
4	2D 1H-13C HSQC	1.3 mM NA DNA (5'-D(*CP*GP*AP*TP*GP*TP*AP*CP*AP*TP*CP*G)-3')	90% H2O/10% D2O	100mM phoshate mM	7.4	1 atm	298	Bruker AVANCE 600
5	31P- H COSY	1.3 mM NA DNA (5'-D(*CP*GP*AP*TP*GP*TP*AP*CP*AP*TP*CP*G)-3')	90% H2O/10% D2O	100mM phoshate mM	7.4	1 atm	298	Bruker AVANCE 600

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	600

NMR Ensemble Information
Conformer Selection Criteria
Conformers Calculated Total Number
Conformers Submitted Total Number	10

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	chemical shift assignment	Sparky		Goddard
2	processing	TopSpin		Bruker Biospin
3	structure calculation	MARDIGRAS		N. Ulyanov
4	structure calculation	Amber		Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
5	structure calculation	UCSF Chimera		UCSF
6	peak picking	Sparky		Goddard