4IEN

Crystal Structure of Acyl-CoA Hydrolase from Neisseria meningitidis FAM18


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP8.5290100mM Tris pH8.5, 2M ammonium Phosphate, 10% glycerol, VAPOR DIFFUSION, HANGING DROP, temperature 290K
Crystal Properties
Matthews coefficientSolvent content
4.0469.59

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 152.52α = 90
b = 152.52β = 90
c = 152.52γ = 90
Symmetry
Space GroupP 21 3

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315r2012-08-24MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAUSTRALIAN SYNCHROTRON BEAMLINE MX20.9537Australian SynchrotronMX2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1235.951007972179721
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
122.111000.229

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1VPM235.957567375650399599.970.167910.166510.19449RANDOM29.52
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.925
r_dihedral_angle_4_deg24.927
r_dihedral_angle_3_deg16.975
r_dihedral_angle_1_deg6.838
r_angle_refined_deg2.59
r_angle_other_deg1.598
r_chiral_restr0.144
r_bond_refined_d0.026
r_gen_planes_refined0.014
r_bond_other_d0.01
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.925
r_dihedral_angle_4_deg24.927
r_dihedral_angle_3_deg16.975
r_dihedral_angle_1_deg6.838
r_angle_refined_deg2.59
r_angle_other_deg1.598
r_chiral_restr0.144
r_bond_refined_d0.026
r_gen_planes_refined0.014
r_bond_other_d0.01
r_gen_planes_other0.007
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4840
Nucleic Acid Atoms
Solvent Atoms276
Heterogen Atoms308

Software

Software
Software NamePurpose
Blu-Icedata collection
CCP4model building
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling
CCP4phasing